Image of Instance segmentation of individual tree crowns with YOLOv5: A comparison of approaches using the ForInstance benchmark LiDAR dataset

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Instance segmentation of individual tree crowns with YOLOv5: A comparison of approaches using the ForInstance benchmark LiDAR dataset

Fine-grained information on the level of individual trees constitute key components for forest observation enabling forest management practices tackling the effects of climate change and the loss of biodiversity in forest ecosystems. Such information on individual tree crowns (ITC's) can be derived from the application of ITC segmentation approaches, which utilize remotely sensed data. However, many ITC segmentation approaches require prior knowledge about forest characteristics, which is difficult to obtain for parameterization. This can be avoided by the adoption of data-driven, automated workflows based on convolutional neural networks (CNN). To contribute to the advancements of efficient ITC segmentation approaches, we present a novel ITC segmentation approach based on the YOLOv5 CNN. We analyzed the performance of this approach on a comprehensive international unmanned aerial laser scanning (UAV-LS) dataset (ForInstance), which covers a wide range of forest types. The ForInstance dataset consists of 4192 individually annotated trees in high-density point clouds with point densities ranging from 498 to 9529 points m-2 collected across 80 sites. The original dataset was split into 70% for training and validation and 30% for model performance assessment (test data). For the best performing model, we observed a F1-score of 0.74 for ITC segmentation and a tree detection rate (DET %) of 64% in the test data. This model outperformed an ITC segmentation approach, which requires prior knowledge about forest characteristics, by 41% and 33% for F1-score and DET %, respectively. Furthermore, we tested the effects of reduced point densities (498, 50 and 10 points per m-2) on ITC segmentation performance. The YOLO model exhibited promising F1-scores of 0.69 and 0.62 even at point densities of 50 and 10 points m-2, respectively, which were between 27% and 34% better than the ITC approach that requires prior knowledge.
Furthermore, the areas of ITC segments resulting from the application of the best performing YOLO model were close to the reference areas (RMSE = 3.19 m-2), suggesting that the YOLO-derived ITC segments can be used to derive information on ITC level.

Availability
42621.3678Perpustakaan BIG (Eksternal Harddisk)Available
Detail Information
Series Title
ISPRS Open Journal of Photogrammetry and Remote Sensing
Call Number
621.3678
Publisher
Amsterdam : Elsevier.,
Collation
15 hlm PDF, 9.848 KB
Language
Inggris
ISBN/ISSN
1872-8235
Classification
621.3678
Content Type
text
Media Type
-
Carrier Type
-
Edition
Vol.9, August 2023
Subject(s)
UAV Laser scanning
Deep learning
Individual tree crown segmentation
Canopy height model
Yolov5
For Instance
Specific Detail Info
-
Statement of Responsibility
Other version/related

No other version available

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  • Instance segmentation of individual tree crowns with YOLOv5: A comparison of approaches using the ForInstance benchmark LiDAR dataset
    Fine-grained information on the level of individual trees constitute key components for forest observation enabling forest management practices tackling the effects of climate change and the loss of biodiversity in forest ecosystems. Such information on individual tree crowns (ITC's) can be derived from the application of ITC segmentation approaches, which utilize remotely sensed data. However, many ITC segmentation approaches require prior knowledge about forest characteristics, which is difficult to obtain for parameterization. This can be avoided by the adoption of data-driven, automated workflows based on convolutional neural networks (CNN). To contribute to the advancements of efficient ITC segmentation approaches, we present a novel ITC segmentation approach based on the YOLOv5 CNN. We analyzed the performance of this approach on a comprehensive international unmanned aerial laser scanning (UAV-LS) dataset (ForInstance), which covers a wide range of forest types. The ForInstance dataset consists of 4192 individually annotated trees in high-density point clouds with point densities ranging from 498 to 9529 points m-2 collected across 80 sites. The original dataset was split into 70% for training and validation and 30% for model performance assessment (test data). For the best performing model, we observed a F1-score of 0.74 for ITC segmentation and a tree detection rate (DET %) of 64% in the test data. This model outperformed an ITC segmentation approach, which requires prior knowledge about forest characteristics, by 41% and 33% for F1-score and DET %, respectively. Furthermore, we tested the effects of reduced point densities (498, 50 and 10 points per m-2) on ITC segmentation performance. The YOLO model exhibited promising F1-scores of 0.69 and 0.62 even at point densities of 50 and 10 points m-2, respectively, which were between 27% and 34% better than the ITC approach that requires prior knowledge. Furthermore, the areas of ITC segments resulting from the application of the best performing YOLO model were close to the reference areas (RMSE = 3.19 m-2), suggesting that the YOLO-derived ITC segments can be used to derive information on ITC level.
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